Vue TY, Bluske K, Alishahi A, Yang L, Koyano-Nakagawa N, Novitch B, Nakagawa Y (2009). Sonic hedgehog signaling controls thalamic progenitor identity and nuclei specification in mice. Journal of Neuroscience, 29: 4484-4497.
Kim EJ, Bastise J, Nakagawa Y, Johnson JE (2008). Ascl1 (Mash1) lineage cells contribute to discrete cell populations in CNS architecture. Molecular and Cellular Neuroscience 34: 595-606.
Joshua Aaker, Andrea L. Patineau, Hyunjin Yang, David T. Ewart, Wuming Gong, Tongbin Li, Yasushi Nakagawa, Steven C. McLoon and Naoko Koyano-Nakagawa (2009) Feed-back regulation of Ngn2 activity by MTGR1 is required for progression of neurogenesis. Molecular Cellular Neuroscience, in press.
Alishahi A, Koyano-Nakagawa N, and Nakagawa Y. (2009) Regional expression of MTG genes in the developing mouse central nervous system. Developmental Dynamics, 238, 2095-2102.
Vue, TY, Aaker, J., Taniguchi, A., Kazemzadeh, C., Skidmore, JM., Martin, DM., Martin, JF., Treier, M., and Nakagawa, Y. (2007) Characterization of progenitor domains in the developing mouse thalamus. J. Comparative Neurology 505, 73-91.
Burns TC, Ortiz-Gonzales XR, Gutierrez-Perez M, Keene CD, Sharda R, Demorest ZL, Jiang Y, Nelson-Holte M, Soriano M, Nakagawa Y, Luquin MR, Garcia-Verdugo JM, Prosper F, Low WC, Verfaillie CM (2006). Thymidine analogs are transferred from pre-labeled donor to host cells in the central nervous system after transplantation: a word of caution. Stem Cells, 24: 1121-1127.
Nakagawa, Y. and O'Leary, DDM. (2003) Patterned expression of orphan nuclear receptor genes RORa and RORb in developing mouse forebrain. Developmental Neuroscience (in press).
O'Leary, DDM. and Nakagawa, Y. (2002) Patterning center, regulatory genes, and extrinsic mechanisms controlling the arealization of the neocortex. Current Opinions in Neurobiology 12, 14-25.
Nakagawa, Y. and O'Leary, DDM. (2001) Combinatorial expression patterns of LIM-homeodomain and other regulatory genes parcellate developing thalamus. Journal of Neuroscience 21, 2711-2725.
Nakagawa, Y., Johnson, JE., and O'Leary, DDM. (1999) Graded and areal expression patterns of regulatory genes and cadherins in embryonic neocortex independent of thalamocortical input. Journal of Neuroscience 19, 10877-10885.
Tuttle, R.*, Nakagawa, Y.*, Johnson, JE., and O'Leary, DDM. (1999) Defects in thalamocortical axon pathfinding correlate with altered cell domains in Mash-1 deficient mice (*co-first authors). Development 126, 1903-1916.
Nakagawa, Y., Kaneko, T., Ogura, T., Suzuki, T., Torii, M., Kaibuchi, K., Arai, K., Nakamura, S., and Nakafuku, M. (1996) Roles of cell-autonomous mechanisms for differential expression of region-specific transcription factors in neuroepithelial cells. Development 122, 2449-2464.
Nakagawa, Y., Kosugi, H., Miyajima,.A., Arai, K., and Yokota, T. (1994) Structure of the gene encoding the alpha subunit of the human granulocyte-macrophage colony stimulating factor receptor: Implications for the evolution of the cytokine receptor superfamily. Journal of Biological Chemistry 269, 10905-12.